DNA.py File Reference

Go to the source code of this file.

Classes
class	Evolife.Genetics.DNA.DNA
	class DNA: individuals' 'DNA' defined as a string of bits More...

Namespaces
namespace	Evolife
namespace	Evolife.Genetics
namespace	Evolife.Genetics.DNA
	Genomes in EVOLIFE are defined as a binary strings.

Functions
def	Evolife.Genetics.DNA.read_DNA (self, start, end, coding=None)
	reads a chunk of DNA More...
def	Evolife.Genetics.DNA.hamming (self, alter)
	computes the Hamming distance between two DNA strings More...
def	Evolife.Genetics.DNA.get_DNA (self)
	returns DNA as a tuple More...
def	Evolife.Genetics.DNA.display (self)
def	Evolife.Genetics.DNA.save (self)

Variables
bool	Evolife.Genetics.DNA.NUMPY = False
	Evolife.Genetics.DNA.pos = random.randint(0, self.nb_nucleotides - 1)
	mutation_number = (mutation_rate * self.nb_nucleotides) / 1000 if randint(1,1000) < 1 + ((mutation_rate * self.nb_nucleotides) % 1000) : mutation_number += 1 performing mutations More...
	Evolife.Genetics.DNA.value = Tools.GrayTable.Gray2Int(value)
	value += self.__dna[pos]* 2 ** (end - 1 - pos) More...
	Evolife.Genetics.DNA.mother = DNA(9, Blank=False)
	Evolife.Genetics.DNA.father = DNA(9, Blank=False)
	Evolife.Genetics.DNA.child = DNA(9)