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Evolife
Evolife has been developed to study Genetic algorithms, Natural evolution and behavioural ecology.
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Evolife
Evolife has been developed to study Genetic algorithms, Natural evolution and behavioural ecology.
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Individual + genome + phenome + social links. More...
Public Member Functions | |
| def | __init__ (self, Scenario, ID=None, Newborn=True, MaxFriends=0) |
| Merely calls parent classes' constructors. More... | |
| def | observation (self, GroupExaminer) |
| stores genome, phenome, social links and location into GroupExaminer More... | |
| def | dies (self) |
| Action to be performed when dying More... | |
 Public Member Functions inherited from Evolife.Ecology.Individual.Individual | |
| def | __init__ (self, Scenario, ID=None, Newborn=True) |
| def | aging (self, step=1) |
| Increments the individual's age. More... | |
| def | accident (self, loss=1) |
| The victim suffers from a loss of life points. More... | |
| def | dead (self) |
| An individual is dead if it is too old or has lost all its 'LifePoints'. More... | |
| def | dies (self) |
| Action to be performed when dying More... | |
| def | score (self, bonus=0, FlagSet=False) |
| Sets score or adds points to score, depending on FlagSet - Returns score value. More... | |
| def | signature (self) |
| returns age and score More... | |
| def | observation (self, GroupExaminer) |
| stores individual's signature in 'GroupExaminer' More... | |
| def | display (self, erase=False) |
| can be used to display individuals More... | |
| def | __bool__ (self) |
| Public Member Functions inherited from Evolife.Genetics.Genome.Genome | |
| def | __init__ (self, Scenario) |
| def | update (self) |
| gene values are read from DNA and stored in Genes More... | |
| def | gene_value (self, name) |
| absolute intensity addressed trough name More... | |
| def | gene_relative_value (self, name) |
| relative intensity (between 0 and 100) addressed through name More... | |
| def | locus_value (self, locus) |
| absolute intensity addressed trough locus More... | |
| def | locus_relative_value (self, locus) |
| relative intensity (between 0 and 100) addressed through locus More... | |
| def | signature (self) |
| returns all gene relative values - useful for statistics and display More... | |
| Public Member Functions inherited from Evolife.Genetics.DNA.DNA | |
| def | __init__ (self, Scenario, Nb_nucleotides) |
| def | DNAfill (self, Nucleotides) |
| fills the DNA with given Nucleotides More... | |
| def | hybrid (self, mother, father, number_crossover=-1) |
| builds the child's DNA from the parents' DNA More... | |
| def | mutate (self, mutation_rate=-1) |
| computing the expected number of mutations More... | |
| Public Member Functions inherited from Evolife.Ecology.Phenotype.Phenome | |
| def | __init__ (self, Scenario, FlagRandom=True) |
| creates a dictionary of Phenes as defined by Scenario.phenemap() More... | |
| def | Phene_value (self, name, Value=None, Levelling=False) |
| reads or sets the value of a phene More... | |
| def | Phene_relative_value (self, name) |
| returns a Phene's value between 0 and 100 More... | |
| def | signature (self) |
| returns phene values as a list of relative values More... | |
| Public Member Functions inherited from Evolife.Social.Alliances.Follower | |
| def | __init__ (self, MaxGurus, MaxFollowers=0) |
| calls the Friend constructor for followees. More... | |
| def | F_affiliable (self, perf, Guru, G_perf, conservative=True) |
| Checks whether affiliation is possible by checking acceptance both in friends and in followers. More... | |
| def | F_follow (self, perf, G, G_perf, conservative=True) |
| the individual wants to be G's disciple because of some of G's performance G may evaluate the individual's performance too More... | |
| def | G_quit_ (self, Guru) |
| the individual no longer follows its guru More... | |
| def | F_quit_ (self, Follower) |
| the individual does not want its disciple any longer More... | |
| def | get_friend (self, Offer, Partner, PartnerOffer) |
| Checks mutual acceptance and then establishes friendship. More... | |
| def | end_friendship (self, Partner) |
| Partners remove each other from their address book. More... | |
| def | nbFollowers (self) |
| def | follower_rank (self, Friend) |
| Returns Friend's rank among self's followers. More... | |
| def | forgetAll (self) |
| calls 'detach' for self's followers and then for self. More... | |
| def | detach (self) |
| The individual quits its guru and quits its followers. More... | |
| def | consistency (self) |
| checks social links consistency (self belongs to the followers of its followees) More... | |
| Public Member Functions inherited from Evolife.Social.Alliances.Friend | |
| def | __init__ (self, MaxFriends=1) |
| Defines Friend as a club. More... | |
| def | accepts (self, F_perf) |
| asymmetrical links # More... | |
| def | affiliable (self, F_perf, conservative=True) |
| Checks whether affiliation is possible. More... | |
| def | follow (self, F, F_perf, conservative=True, Quit=None) |
| the individual wants to be F's disciple due to F's performance More... | |
| def | follows (self, Friend) |
| checks whether Friend belongs to actual friends More... | |
| def | quit_ (self, Friend=None) |
| the individual no longer follows its friend More... | |
| def | best_friend (self) |
| def | Max (self) |
| def | Friends (self, ordered=True) |
| returns a list of friend names (possibly ordered by decreasing performance) More... | |
| def | names (self) |
| returns the list of friends' names More... | |
| def | rank (self, Friend) |
| returns the rank of Friend in the list of decreasing performances More... | |
| def | nbFriends (self) |
| Number of friends. More... | |
| def | size (self) |
| Number of friends. More... | |
| def | sizeMax (self) |
| def | lessening_friendship (self, Factor=0.9) |
| all performances are reduced (represents temporal erosion) More... | |
| def | checkNetwork (self, membershipFunction=None) |
| updates links by forgetting friends that are gone More... | |
| def | detach (self) |
| The individual quits all its friends More... | |
| def | acquaintable (self, Offer, Partner, PartnerOffer) |
| symmetrical links # More... | |
| def | get_friend (self, Offer, Partner, PartnerOffer) |
| Checks mutual acceptance and then establishes friendship. More... | |
| def | acquainted (self, Partner) |
| same as get_friend/3 with no performance More... | |
| def | end_friendship (self, Partner) |
| Partners remove each other from their address book. More... | |
| def | forgetAll (self) |
| The individual quits its friends More... | |
| def | __iter__ (self) |
| def | __len__ (self) |
| def | social_signature (self) |
| returns the ordered list of friends More... | |
| def | signature (self) |
| same as social_signature More... | |
Additional Inherited Members | |
| Public Attributes inherited from Evolife.Ecology.Individual.Individual | |
| Scenario | |
| age | |
| ID | |
| location | |
| LifePoints | |
| Public Attributes inherited from Evolife.Genetics.Genome.Genome | |
| Scenario | |
| genome | |
| Public Attributes inherited from Evolife.Genetics.DNA.DNA | |
| Scenario | |
| nb_nucleotides | |
| Public Attributes inherited from Evolife.Ecology.Phenotype.Phenome | |
| Scenario | |
| Phenes | |
| Public Attributes inherited from Evolife.Social.Alliances.Follower | |
| followers | |
| Public Attributes inherited from Evolife.Social.Alliances.Friend | |
| friends | |
Individual + genome + phenome + social links.
Definition at line 110 of file Individual.py.
| def Evolife.Ecology.Individual.EvolifeIndividual.__init__ | ( | self, | |
| Scenario, | |||
ID = None, |
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Newborn = True, |
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MaxFriends = 0 |
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| ) |
Merely calls parent classes' constructors.
Reimplemented from Evolife.Ecology.Individual.Individual.
Definition at line 113 of file Individual.py.
| def Evolife.Ecology.Individual.EvolifeIndividual.dies | ( | self | ) |
Action to be performed when dying
Reimplemented from Evolife.Ecology.Individual.Individual.
Definition at line 135 of file Individual.py.
| def Evolife.Ecology.Individual.EvolifeIndividual.observation | ( | self, | |
| GroupExaminer | |||
| ) |
stores genome, phenome, social links and location into GroupExaminer
Reimplemented from Evolife.Ecology.Individual.Individual.
Definition at line 125 of file Individual.py.
1.9.3