Evolife.Genetics.Genome.Genome Class Reference

class Genome: list of genes carried by individuals More...

Inheritance diagram for Evolife.Genetics.Genome.Genome:

Collaboration diagram for Evolife.Genetics.Genome.Genome:

Public Member Functions
def	__init__ (self, Scenario)
def	update (self)
	gene values are read from DNA and stored in Genes More...
def	gene_value (self, name)
	absolute intensity addressed trough name More...
def	gene_relative_value (self, name)
	relative intensity (between 0 and 100) addressed through name More...
def	locus_value (self, locus)
	absolute intensity addressed trough locus More...
def	locus_relative_value (self, locus)
	relative intensity (between 0 and 100) addressed through locus More...
def	signature (self)
	returns all gene relative values - useful for statistics and display More...
Public Member Functions inherited from Evolife.Genetics.DNA.DNA
def	__init__ (self, Scenario, Nb_nucleotides)
def	DNAfill (self, Nucleotides)
	fills the DNA with given Nucleotides More...
def	hybrid (self, mother, father, number_crossover=-1)
	builds the child's DNA from the parents' DNA More...
def	mutate (self, mutation_rate=-1)
	computing the expected number of mutations More...

Public Attributes
	Scenario
	genome
Public Attributes inherited from Evolife.Genetics.DNA.DNA
	Scenario
	nb_nucleotides

Detailed Description

class Genome: list of genes carried by individuals

Definition at line 42 of file Genome.py.

Constructor & Destructor Documentation

__init__()

def Evolife.Genetics.Genome.Genome.__init__	(		self,
			Scenario
	)

Reimplemented from Evolife.Genetics.DNA.DNA.

Reimplemented in Evolife.Ecology.Individual.EvolifeIndividual.

Definition at line 46 of file Genome.py.

Member Function Documentation

gene_relative_value()

def Evolife.Genetics.Genome.Genome.gene_relative_value	(		self,
			name
	)

relative intensity (between 0 and 100) addressed through name

Definition at line 66 of file Genome.py.

gene_value()

def Evolife.Genetics.Genome.Genome.gene_value	(		self,
			name
	)

absolute intensity addressed trough name

Definition at line 61 of file Genome.py.

locus_relative_value()

def Evolife.Genetics.Genome.Genome.locus_relative_value	(		self,
			locus
	)

relative intensity (between 0 and 100) addressed through locus

Definition at line 76 of file Genome.py.

locus_value()

def Evolife.Genetics.Genome.Genome.locus_value	(		self,
			locus
	)

absolute intensity addressed trough locus

Definition at line 71 of file Genome.py.

signature()

def Evolife.Genetics.Genome.Genome.signature

(

self

)

returns all gene relative values - useful for statistics and display

Definition at line 81 of file Genome.py.

update()

def Evolife.Genetics.Genome.Genome.update

(

self

)

gene values are read from DNA and stored in Genes

Definition at line 53 of file Genome.py.

Member Data Documentation

genome

Evolife.Genetics.Genome.Genome.genome

Definition at line 48 of file Genome.py.

Scenario

Evolife.Genetics.Genome.Genome.Scenario

Definition at line 47 of file Genome.py.

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The documentation for this class was generated from the following file:

• Genetics/Genome.py